Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953249.1_cds_XP_016492486.1_82693
CDS Infomation

[gene=LOC107811994] [db_xref=GeneID:107811994] [protein=exonuclease 1-like isoform X2] [protein_id=XP_016492486.1] [location=complement(join(282174..282613,282757..282977,283180..283272,283556..283653,284174..284274,284439..284553,284672..284821,285038..285082,285545..285623,285721..285881))] [gbkey=CDS]
Sequence

ATGGAGCTGTGTCTTAATTTGGAGGGCGACAAGAAATTGCAGTACTTGAATTACTTCATG
CACCGAATTAACCTGCTTCGACATTATAAGATTACTCCTGTAGTTGTTTTTGATGGTGGG
AACTTACCCTGCAAGTCTCGAACTGAAGATGAAAGGCACAGGAGAAGGAAAACAAATAGA
GATCAGGCAATGTTGAAGCTAAAGGAAGGAAATGTTGCTGGCGCTGTCGAGCTCTTCCAG
AGGGCAGTGAGTGTCACTCCATCAATGGCACATCAACTCATTCAGATTCTGAAGTCGGAG
AATATAGAGTTTGTTGTAGCACCATATGAAGCTGATGCACAATTAGCCTACTTGTCTAGC
CTAGAAGAAGAAAAGAGTGGAATTGTAGCCGTGATTTCTGAAGATAGTGACTTACTGGCA
TATGGCTGTCCTGCTGTTTTCTTTAAGATGGATTCCCATGGCAATGGTCAAGAAGTGGAA
CTAGACCGTGTTTTCAGTTCTGCTACTCTCGTTCCTTCATTCAGACATTTCAACCAAGAT
TTGTTTACAGGCATGTGCGTCTTAGCTGGCTGTGATTTTCTTCCGTCTGTCCCTGGTATA
GGAATTGCAAAAGCTTATAATCTGGTCTCCAAGTATCGGAACTTAGATCGAGTTCTTTCC
ATCTTGAAGTTTGAGAAGGGAGATCAAGTGCCTGAAGATTACACAAAATCATTTAAAGAA
GCAGTTGCAGTCTTCCATCATGCTAGAATATATGATGTTAGTTTGAAGCGGACCAAGCAC
TTGAAACCTGTCCCAGAACAGCTGTTGCAGTTTCTGGATGAAGAACTTGACTTCTTAGGA
CCAGAAATTCTTCCATCATTGGCAACTGCAATTGCTCAAGGTAGCATAGATCCTTGTACA
ATGGAGGCCTTCGATTTCTTTCCAAACATGGTAAATCATGTGTCTACTGCAAACGTCAAG
AAAATTTGCGGTCCATTCTCTCGACAACAGGCATCTGCTCAAGCTTCAAAAGACTGCAGT
TTTCTTGCTATTTCTTCTAGTAAAACCAGAAAAGAAACAACAGTGGTGGAGACGAAGCAA
ACCTCGGATGAACAGAAGCAGTGTCCATTTATGGATGACAGGGAGTGCATAGAGGAAGCA
GTAGCTCTTCAAAACTTGCTATGCCCTTCAATATCAACTAGGAAAACAGTCGGAAAAGAG
AAAAAGAGTCGGCAGAAAGAAGTGTTGAAAGTTCCAGATAATAATCCTTTTAGGAAAAGA
AAAGTGGAGGAAATTGAGCCAGATGAATTGGAAAGTGTTACTGAACAAATCTCAGAAGTG
ACTGAGGTTGAAAGCCTGGAAGTTGTATGTACTACTCCAGAATCACAAAGAAGTGTGGAA
TCTAAGCCGATTAAAAGAATTGAATTAAGAAAAGTTACCAACGAAAGGAAGGTTAAAAGG
AGTAATTGTCAAAGTTCAGAAAACAAGAAAAACTCTATACTGAATTTCTTTTCTCGAGTG
TAA

Peptide Sequence

PEP ID

XP_016492486.1
PEP Infomation

PREDICTED: exonuclease 1-like isoform X2 [Nicotiana tabacum]
Sequence

MELCLNLEGDKKLQYLNYFMHRINLLRHYKITPVVVFDGGNLPCKSRTEDERHRRRKTNR
DQAMLKLKEGNVAGAVELFQRAVSVTPSMAHQLIQILKSENIEFVVAPYEADAQLAYLSS
LEEEKSGIVAVISEDSDLLAYGCPAVFFKMDSHGNGQEVELDRVFSSATLVPSFRHFNQD
LFTGMCVLAGCDFLPSVPGIGIAKAYNLVSKYRNLDRVLSILKFEKGDQVPEDYTKSFKE
AVAVFHHARIYDVSLKRTKHLKPVPEQLLQFLDEELDFLGPEILPSLATAIAQGSIDPCT
MEAFDFFPNMVNHVSTANVKKICGPFSRQQASAQASKDCSFLAISSSKTRKETTVVETKQ
TSDEQKQCPFMDDRECIEEAVALQNLLCPSISTRKTVGKEKKSRQKEVLKVPDNNPFRKR
KVEEIEPDELESVTEQISEVTEVESLEVVCTTPESQRSVESKPIKRIELRKVTNERKVKR
SNCQSSENKKNSILNFFSRV

Transcript Sequence

Gene sequence data has not been registered.